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[Opal] Mac binary problems


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  • From: Ted Burleson <tburleso AT engr.colostate.edu>
  • To: opal AT lists.psi.ch
  • Subject: [Opal] Mac binary problems
  • Date: Mon, 19 Mar 2012 14:51:26 -0600
  • List-archive: <https://lists.web.psi.ch/pipermail/opal/>
  • List-id: The OPAL Discussion Forum <opal.lists.psi.ch>

I am trying to use the opal mac binary 1.1.9 on an iMac running OSX Lion 10.7.3

I have all the prerequisite libraries installed

Every attempt to run the executable produces nothing but errors.

teds-imac:~ Ted$ /Users/Ted/opal_svn/opal.1.1.9.mac ; exit;
*** The MPI_Comm_rank() function was called before MPI_INIT was invoked.
*** This is disallowed by the MPI standard.
*** Your MPI job will now abort.
[teds-imac.engr.colostate.edu:97728] Abort before MPI_INIT completed successfully; not able to guarantee that all other processes were killed!
opal.1.1.9.mac(97728) malloc: *** error for object 0x1010a8560: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
Abort trap: 6
logout

[Process completed]




or



teds-imac:/ Ted$ mpirun -np 2 opal.1.1.9.mac ~/opal_svn/OPAL/opal-Tests/Basics/test1.in --commlib mpi --info 0 --warn 0
[teds-imac:97704] *** Process received signal ***
[teds-imac:97704] Signal: Segmentation fault: 11 (11)
[teds-imac:97704] Signal code: Address not mapped (1)
[teds-imac:97704] Failing at address: 0x7ff3b3d205d0
[teds-imac:97704] [ 0] 2   libsystem_c.dylib                   0x00007fff8f21dcfa _sigtramp + 26
[teds-imac:97704] *** End of error message ***
Segmentation fault: 11



or - tried running as super user ....


teds-imac:opal_svn Ted$ sudo mpirun -np 2 ~/opal_svn/opal.1.1.9.mac ~/opal_svn/OPAL/opal-Tests/Basics/test1.in --commlib mpi --info 0 --warn 0
Password:
Ippl> CommMPI: Parent process waiting for children ...
Ippl> CommMPI: Started job 1 on host `teds-imac.engr.colostate.edu'.
Ippl> CommMPI: Child 1 ready.
Ippl> CommMPI: Initialization complete.
{0}>                ____  _____       ___
{0}>               / __ \|  __ \ /\   | |
{0}>              | |  | | |__) /  \  | |
{0}>              | |  | |  ___/ /\ \ | |
{0}>              | |__| | |  / ____ \| |____
{0}>               \____/|_| /_/    \_\______|
OPAL {0}>
OPAL {0}> This is OPAL (Object Oriented Parallel Accelerator Library) Version 1.1.9 SVN version 12466  (c) PSI, http://amas.web.psi.ch
OPAL {0}>
OPAL {0}> Please send cookies, goodies or other motivations (wine and beer ... ) to andreas.adelmann AT psi.ch
OPAL {0}> Time: 14.50.28 date: 19/03/2012
opal.1.1.9.mac(97734) malloc: *** error for object 0x1010a8560: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
opal.1.1.9.mac(97735) malloc: *** error for object 0x1010a8560: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
[teds-imac:97735] *** Process received signal ***
[teds-imac:97735] Signal: Abort trap: 6 (6)
[teds-imac:97735] Signal code:  (0)
[teds-imac:97734] *** Process received signal ***
[teds-imac:97734] Signal: Abort trap: 6 (6)
[teds-imac:97734] Signal code:  (0)
[teds-imac:97735] *** End of error message ***
[teds-imac:97734] *** End of error message ***
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 97734 on node teds-imac.engr.colostate.edu exited on signal 6 (Abort trap: 6).



I appreciate any assistance. I really need to get this going!

-Thanks


--
-Ted Burleson
CSU ECE GRA
tburleso AT engr.colostate.edu
970-491-8851




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