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[Opal] RNA Sequencing Services (Total RNA, mRNA, Small RNA)

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  • From: CD Genomics <customer AT>
  • To: opal AT
  • Subject: [Opal] RNA Sequencing Services (Total RNA, mRNA, Small RNA)
  • Date: Tue, 13 May 2014 11:42:10 +0000 (UTC)
  • List-archive: <>
  • List-id: The OPAL Discussion Forum <>

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Dear Friends,

CD Genomics provides RNA sequencing services within a GLP compliant environment utilizing a variety of technologies. Our technology portfolio includes industry-leading next-gen systems capable of RNA Seq such as the Illumina HiSeq & MiSeq and Ion Torrent platforms.

Next Generation Sequencing Platforms Capable of RNA Sequencing:

  • Illumina HiSeqTM 2000 (Official Service Provider)
  • Illumina MiSeqTM
  • Ion Torrent PGMTM

RNA Seq Data Analysis & Deliverables:
Some of the benefits of CD Genomics's RNA Seq services for small RNA and transcriptome profiling include:

  • Highly Quantitative: No probe bias, direct read counting.
  • Qualitative Data: SNP/Variant detection, splice-junction & strand-specific transcriptional data.
  • Comprehensive Analysis: Non-coding RNA, miRNA, small RNA & mRNA detection.
  • Full Bioinformatics Support: Customized data reporting, QC and statistical analysis.

Bioinformatics Deliverables for mRNA Seq and Whole-Transcriptome Sequencing:

  • Raw sequencing reads and quality scores
  • Alignment report summarizing mapping results
  • Reads matching the genome including position & number of mismatches
  • Counts file containing the number of reads matching annotated exons
  • Coverage files allowing visualization in the UCSC genome browser
  • Optimization plots to aid novel transcribed region identification

Nancy Russ
Customer Service

45-1 Ramsey Road, Shirley, NY 11967, USA
Tel: 1-631-626-9181
Fax: 1-631-614-7828
Email:info AT

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  • [Opal] RNA Sequencing Services (Total RNA, mRNA, Small RNA), CD Genomics, 05/13/2014

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