The OPAL Discussion Forum

[CD Genomics <customer AT cdgenomics-mail.com>]

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Dear Friends,

CD Genomics provides RNA sequencing services within a GLP compliant environment utilizing a variety of technologies. Our technology portfolio includes industry-leading next-gen systems capable of RNA Seq such as the Illumina HiSeq & MiSeq and Ion Torrent platforms.

Next Generation Sequencing Platforms Capable of RNA Sequencing:

• Illumina HiSeq^TM 2000 (Official Service Provider)
• Illumina MiSeq^TM
• Ion Torrent PGM^TM

RNA Seq Data Analysis & Deliverables:
Some of the benefits of CD Genomics's RNA Seq services for small RNA and transcriptome profiling include:

• Highly Quantitative: No probe bias, direct read counting.
• Qualitative Data: SNP/Variant detection, splice-junction & strand-specific transcriptional data.
• Comprehensive Analysis: Non-coding RNA, miRNA, small RNA & mRNA detection.
• Full Bioinformatics Support: Customized data reporting, QC and statistical analysis.

Bioinformatics Deliverables for mRNA Seq and Whole-Transcriptome Sequencing:

• Raw sequencing reads and quality scores
• Alignment report summarizing mapping results
• Reads matching the genome including position & number of mismatches
• Counts file containing the number of reads matching annotated exons
• Coverage files allowing visualization in the UCSC genome browser
• Optimization plots to aid novel transcribed region identification

Sincerely,
Nancy Russ
Customer Service

45-1 Ramsey Road, Shirley, NY 11967, USA
Tel: 1-631-626-9181
Fax: 1-631-614-7828
Email：info AT CD-Genomics.org

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