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[Opal] Difficulty compiling on ScientificLinux


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  • From: <ccarson AT nokomisinc.com>
  • To: opal AT lists.psi.ch
  • Subject: [Opal] Difficulty compiling on ScientificLinux

Dear All,

I am compiling on a ScientificLinux 7 VirtualBox (running on Windows 7) when,
right at the end, this happens.

[ 99%] Built target OPALib
[ 99%] Building CXX object src/CMakeFiles/opal.dir/Main.cpp.o
[100%] Linking CXX executable opal
/home/carsonc/software/lib/libml.a(ml_agg_METIS.c.o): In function
`ML_Aggregate_CoarsenMETIS':
ml_agg_METIS.c:(.text+0xbb2): undefined reference to `METIS_SetDefaultOptions'
ml_agg_METIS.c:(.text+0x215c): undefined reference to
`METIS_PartGraphRecursive'
ml_agg_METIS.c:(.text+0x2b75): undefined reference to `METIS_PartGraphKway'
ml_agg_METIS.c:(.text+0x3bbe): undefined reference to `METIS_NodeND'
/home/carsonc/software/lib/libml.a(ml_agg_VBMETIS.c.o): In function
`ML_Aggregate_CoarsenVBMETIS':
ml_agg_VBMETIS.c:(.text+0x1e6b): undefined reference to
`METIS_SetDefaultOptions'
ml_agg_VBMETIS.c:(.text+0x2167): undefined reference to
`METIS_PartGraphRecursive'
ml_agg_VBMETIS.c:(.text+0x23e1): undefined reference to `METIS_PartGraphKway'
/home/carsonc/software/lib/libml.a(ml_agg_ParMETIS.c.o): In function
`ML_DecomposeGraph_with_ParMETIS':
ml_agg_ParMETIS.c:(.text+0x11b3): undefined reference to
`ParMETIS_V3_PartKway'
/home/carsonc/software/lib/libzoltan.a(parmetis_interface.c.o): In function
`Zoltan_ParMetis':
parmetis_interface.c:(.text+0x93c): undefined reference to
`ParMETIS_V3_PartKway'
parmetis_interface.c:(.text+0xd67): undefined reference to
`ParMETIS_V3_PartGeom'
parmetis_interface.c:(.text+0xf14): undefined reference to
`ParMETIS_V3_PartGeomKway'
parmetis_interface.c:(.text+0xf7d): undefined reference to
`METIS_SetDefaultOptions'
parmetis_interface.c:(.text+0xfe7): undefined reference to
`METIS_PartGraphKway'
parmetis_interface.c:(.text+0x10ed): undefined reference to
`ParMETIS_V3_AdaptiveRepart'
parmetis_interface.c:(.text+0x11f2): undefined reference to
`ParMETIS_V3_RefineKway'
/home/carsonc/software/lib/libzoltan.a(parmetis_interface.c.o): In function
`Zoltan_ParMetis_Order':
parmetis_interface.c:(.text+0x1716): undefined reference to
`ParMETIS_V3_NodeND'
parmetis_interface.c:(.text+0x1ce2): undefined reference to
`METIS_SetDefaultOptions'
parmetis_interface.c:(.text+0x1d14): undefined reference to `METIS_NodeND'
collect2: error: ld returned 1 exit status
make[2]: *** [src/opal] Error 1
make[1]: *** [src/CMakeFiles/opal.dir/all] Error 2
make: *** [all] Error 2

I tried to follow the instructions to the letter and successfully compiled
everything else. Any idea why? It might be helpful to create either a
ScientificLinux "Context" of a successful build or a virtualbox that can be
downloaded and used in lieu of compiling. Thanks!

Cantwell



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