The OPAL Discussion Forum

["Adelmann Andreas (PSI)" <andreas.adelmann AT psi.ch>]

I mean parallel file system …

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Dr. sc. math. Andreas (Andy) Adelmann
Staff Scientist - Deputy Labor Head LSM
Paul Scherrer Institut OHSA/D17  CH-5232 Villigen PSI
Phone Office: xx41 56 310 42 33 Fax: xx41 56 310 31 91
Phone Home: xx41 62 891 91 44
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Friday: ETH HPK G 28   +41 44 632 75 22
============================================
The more exotic, the more abstract the knowledge, 
the more profound will be its consequences.
Leon Lederman 
============================================

On 8 Jun 2018, at 21:05, Adelmann Andreas (PSI) <andreas.adelmann AT psi.ch> wrote:

Well usually you should have a pallet file system such as Lustre or GPFS.

In you case you only read, however maybe with 32 cores this poses already problem.

I am not the expert here maybe Achim could comment.

A

------
Dr. sc. math. Andreas (Andy) Adelmann
Staff Scientist - Deputy Labor Head LSM
Paul Scherrer Institut OHSA/D17  CH-5232 Villigen PSI
Phone Office: xx41 56 310 42 33 Fax: xx41 56 310 31 91
Phone Home: xx41 62 891 91 44
-------------------------------------------------------
Friday: ETH HPK G 28   +41 44 632 75 22
============================================
The more exotic, the more abstract the knowledge, 
the more profound will be its consequences.
Leon Lederman 
============================================

On 8 Jun 2018, at 20:19, Adelmann Andreas (PSI) <andreas.adelmann AT psi.ch> wrote:

To me this is a file-system or H5 problem. 

What type of file system are you using?

Cheers Andreas 

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Dr. sc. math. Andreas (Andy) Adelmann
Staff Scientist - Deputy Labor Head LSM
Paul Scherrer Institut OHSA/D17  CH-5232 Villigen PSI
Phone Office: xx41 56 310 42 33 Fax: xx41 56 310 31 91
Phone Home: xx41 62 891 91 44
-------------------------------------------------------
Friday: ETH HPK G 28   +41 44 632 75 22
============================================
The more exotic, the more abstract the knowledge, 
the more profound will be its consequences.
Leon Lederman 
============================================

On 8 Jun 2018, at 09:56, wangchuan02513 <wangchuan02513 AT 163.com> wrote:

Dear, Colleagues,

My name is Chuan Wang from China Insitute of Atomic Energy. Currently I am testing the parallel efficiency of the new cluster of our cyclotron group with OPAL cyclotron tracker and the input file is per attached. When I test the  case with 4 cores and 16 cores it seems OK, however when I test it with 32 cores (16 cores/cpu, 2cpus in one node), I got error messages which is also per attached.

Does anyone have a clue on that?

Thank you for your help.

--
Sincerely yours
Chuan Wang

e-mail  : cwang AT ciae.ac.cn
              wangchuan02513 AT 163.com 

Tel     : 0086-10-69357590(O) 
MP    : 0086-10-18600605915
Addr. : P.O.BOX. 275(3), Beijing, China 
            China Institute of Atmoic Energy
            Beijing Radioactive Ion Facility 

PostCode: 102413

 

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